Biotin Pulldown Selection

Biotin pulldown selection is an affinity-based method that isolates nucleic acids, proteins, or molecular complexes from a mixture, making it useful for examining specific genetic interactions. The target is tagged with biotin and captured by streptavidin-coated beads; washing removes unbound material, while the retained targets or associated molecules are subsequently analyzed. In genetics, this approach can enrich selected DNA or RNA sequences, recover proteins that bind regulatory regions, and identify interacting partners through downstream assays such as electrophoresis, sequencing, or mass spectrometry. Its selective enrichment improves detection of low-abundance molecules and helps clarify gene regulation, genome organization, and molecular interactions.

Biotin Pulldown Selection - Related Videos

Research

JoVE Journal - Genetics

Biotin-based Pulldown Assay to Validate mRNA Targets of Cellular miRNAs

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Cited by 31 •

2018

This report describes a fast and reliable method for validating mRNA targets of cellular miRNAs. The method uses synthetic biotinylated Locked Nucleic Acid (LNA)-based miRNA mimics to capture target mRNA. Subsequently, streptavidin-coated magnetic beads are employed to pulldown the target mRNA for quantification by qPCR polymerase chain reaction.

Research

JoVE Journal - Biochemistry

Pulldown Assay Coupled with Co-Expression in Bacteria Cells as a Time-Efficient Tool for Testing Challenging Protein-Protein Interactions

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Cited by 1 •

2022

Here, we describe a method for the bacterial co-expression of differentially tagged proteins using a set of compatible vectors, followed by the conventional pulldown techniques to study protein complexes that cannot assemble in vitro.

Assessing the Internalization of Target Surface Proteins Using a Biotin Derivative

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2025

This video demonstrates a method to assess target protein internalization in the mouse cortical astrocytes using biotinylation, followed by cell lysis, streptavidin-based protein extraction, denaturation, and Western blot analysis to confirm successful internalization.

An Avidin-Biotin Conjugation Technique for Presenting Target Antigens on Mycobacterium bovis BCG

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2025

The video demonstrates a technique for loading antigens on Mycobacterium bovis BCG to improve its immunogenic properties. The method uses the avidin-biotin system to coat the bacterial surface with exogenous antigens.

Research

JoVE Journal - Biology
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An In Vitro Assay to Study Platelet Migration Using RGD-Functionalized Avidin-Biotin Tethers

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2024

A detailed protocol for imaging single migrating platelets using RGD-functionalized avidin-biotin tethers with tunable density is provided, revealing that platelets generate enough force to rupture the avidin-biotin bond.

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