Microgrooved Substrate

A microgrooved substrate is a surface engineered with parallel, microscopic grooves that provides physical cues for studying how cells interact with their environment. Its topography influences cell adhesion, spreading, migration, and alignment through contact guidance, as cells reorganize their cytoskeleton and focal adhesions along the groove direction. In biology, these substrates help researchers examine how geometry regulates cell behavior in controlled culture systems. They support studies of tissue organization, wound repair, neuronal growth, and biomaterial design, offering a reproducible way to model the structural features cells encounter in native tissues.

Microgrooved Substrate - Related Videos

Research

JoVE Journal - Biology

Identification of Kinase-substrate Pairs Using High Throughput Screening

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Cited by 1 •

2015

Protein phosphorylation is a central feature of how cells interpret and respond to information in their extracellular milieu. Here, we present a high throughput screening protocol using kinases purified from mammalian cells to rapidly identify kinases that phosphorylate a substrate(s) of interest.

Substrate Oxidation Assay in Cultured Cells: An In Vitro Assay to Quantify Substrate Oxidation in Cells by Measuring Radioactive Signals from Trapped CO2

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2025

This video demonstrates a quantification technique for CO2 released during substrate oxidation using 14C-radiolabeled substrates. The released 14CO2 is trapped in an alkaline solution and quantified by a scintillation counter. The oxidation of different substrates varies between tissues and reflects the pathophysiological condition of the tissue.

Research

JoVE Journal - Biology
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Substrate Generation for Endonucleases of CRISPR/Cas Systems

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Cited by 4 •

2012

CRISPR/Cas systems mediate adaptive immunity in Bacteria and Archaea. Many Cas proteins are proposed to act as endoribonucleases acting on crRNA precursors of varying length. Here we illustrate three different approaches to generate pre-crRNA substrates for the biochemical analysis of Cas endonuclease activity.

Defining Substrate Specificities for Lipase and Phospholipase Candidates

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Cited by 10 •

2016

Many predicted (phospho)lipases are poorly characterized with regard to their substrate specificities and physiological functions. Here we provide a protocol to optimize enzyme activities, search for natural substrates, and propose physiological functions for these enzymes.

Measuring Mitochondrial Substrate Flux in Recombinant Perfringolysin O-Permeabilized Cells

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Cited by 1 •

2021

In this work, we describe a modified protocol to test mitochondrial respiratory substrate flux using recombinant perfringolysin O in combination with microplate-based respirometry. With this protocol, we show how metformin affects mitochondrial respiration of two different tumor cell lines.

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