Endophytic Colonization

Endophytic colonization is the establishment of microorganisms, usually bacteria or fungi, within living plant tissues without causing apparent disease, making it an important interface between microbiology, plant biology, and bioengineering. Microbes enter through roots, stomata, or wounds, then persist in intercellular spaces or vascular tissues by adapting to plant defenses and using enzymes, signaling molecules, and nutrient exchanges that support internal growth. In bioengineering, researchers study and design endophyte-plant partnerships to improve nutrient acquisition, stress tolerance, biological control, phytoremediation, and delivery of beneficial traits. These systems may enable more resilient crops and environmentally sustainable approaches to agriculture and biotechnology.

Endophytic Colonization - Related Videos

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JoVE EoE - Bacterial Growth and Techniques

Enhancing Salt Stress Tolerance in Tomato Plants Through Endophytic Bacterial Colonization

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2025

Endophytic bacteria colonize plant tissues and promote plant growth.To study their impact on tomato plant growth under salt stress, start with sterile seedlings showing developing leaves and roots.Immerse the roots of the experimental seedling in a suspension of endophytic bacteria; leave the control uninoculated.Transfer both groups into sterilized soil to prevent external microbial interference and incubate in a growth chamber.From the soil, the bacteria enter through transient root openings,...

Root-Mediated Endophytic Colonization of Beneficial Bacteria in Rice

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2025

Begin with rice seedlings pre-germinated under dark, aseptic conditions to ensure uniform sprouting.Transfer these seedlings to a flask containing a nutrient-rich, semi-solid medium pre-inoculated with a test bacterium.As the plant grows, the roots release chemotactic compounds into the surrounding medium.These compounds stimulate bacterial proliferation, leading to adhesion, multiplication, and colony formation on the root surface.As the roots develop, the bacteria enter the plant through...

Research

JoVE Journal - Bioengineering
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Establishing Fungal Entomopathogens as Endophytes: Towards Endophytic Biological Control

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Cited by 197 •

2013

This protocol demonstrates two inoculation methods to introduce the fungal entomopathogen Beauveria bassiana as an endophyte in the common bean (Phaseolus vulgaris), in preparation for subsequent evaluations of endophytic biological control.

Research

JoVE Journal - Biology

A Workflow for the Quantitative Assessment of the Endophytic and Epiphytic Bacterial Microbiomes of the Bark of Populus trichocarpa

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2025

This protocol presents a reliable and efficient workflow from sample collection to data analysis for profiling the endophytic and epiphytic bacterial microbiomes present in the bark of Populus trichocarpa.

Isolation, Characterization, and Total DNA Extraction to Identify Endophytic Fungi in Mycoheterotrophic Plants

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Cited by 2 •

2023

The current article aims to provide detailed and adequate protocols for the isolation of plant-associated endophytic fungi, long-term preservation of isolates, morphological characterization, and total DNA extraction for subsequent molecular identification and metagenomic analyses.

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